Mularoni L., Ramos-Rodríguez M. and Pasquali L. The Pancreatic Islet Regulome Browser. Front. Genet. 8 (2017). https://doi.org/10.3389/fgene.2017.00013
The menu under the IRB topic provides access to the Islet Regulome Browser (IRB) application and its code.
plotRegulome
R package. This custom R package contains the necessary functions to download and plot the data contained in the Islet Regulome Browser.
IRB Shiny App code. The IRB app is built using the Shiny R package. The linked github repository contains the code and scripts necessary to build the interactive web app.
Islet Regulome Browser. This link provides access to the IRB web app.
sessionInfo()
R version 4.0.2 (2020-06-22)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Catalina 10.15.5
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
locale:
[1] es_ES.UTF-8/es_ES.UTF-8/es_ES.UTF-8/C/es_ES.UTF-8/es_ES.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] workflowr_1.6.2
loaded via a namespace (and not attached):
[1] Rcpp_1.0.5 rstudioapi_0.11 whisker_0.4 knitr_1.29
[5] magrittr_1.5 R6_2.4.1 rlang_0.4.7 stringr_1.4.0
[9] tools_4.0.2 xfun_0.16 git2r_0.27.1 htmltools_0.5.0
[13] ellipsis_0.3.1 rprojroot_1.3-2 yaml_2.2.1 digest_0.6.25
[17] tibble_3.0.3 lifecycle_0.2.0 crayon_1.3.4 bookdown_0.20
[21] later_1.1.0.1 vctrs_0.3.2 promises_1.1.1 fs_1.4.2
[25] glue_1.4.1 evaluate_0.14 rmarkdown_2.3 stringi_1.4.6
[29] compiler_4.0.2 pillar_1.4.6 backports_1.1.8 httpuv_1.5.4
[33] pkgconfig_2.0.3