All functions
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IRB
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IRB |
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addStepping()
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Add stepping for plotting genes |
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create_clustersRegulome()
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Create clustersRegulome Object |
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create_contactsRegulome()
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Create contactsRegulome Object |
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create_genesRegulome()
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Create genesRegulome Object |
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create_mapsRegulome()
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Create mapsRegulome Object |
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create_snpsRegulome()
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Create snpsRegulome Object |
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create_tfsRegulome()
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Create tfsRegulome Object |
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cytobandColor
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Cytoband color |
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downloadIRB()
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Download IRB datasets |
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emptyPlot()
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Generate emtpy plot |
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generateRandomIRB()
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Generate random IRB parameters |
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ideoCyto
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Cytoband Ideogram |
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plotIdeogramRegulome()
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Plot Ideogram for Regulome Plot |
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plotR()
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Generic plotting methof for Regulome data |
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plotRegulome()
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plotRegulome package
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scaleXCoordinates()
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X axis for genomic coordinates |
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smoothCoverage()
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Smooth Coverage/Contacts |
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themeXYblank()
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Blank X and Y axis ggplot2 theme |
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themeXblank()
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Blank X axis ggplot2 theme |
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themeYblank()
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Blank Y axis ggplot2 theme |