Software

UMI4Cats

Bioconductor Github

R package to analyze UMI-4C chromatin interaction data.

Ramos‑Rodríguez, Mireia, Subirana‑Granés, M., & Pasquali, L. (2021). UMI4Cats: An R package to analyze chromatin contact profiles obtained by UMI‑4C. Bioinformatics. https://doi.org/10.1093/bioinformatics/btab392

Islet Regulome Browser

Web Tool Github

Dynamic website that allows interactive exploration genetic and epigenetic data from islet-related cell-types and tissues.

Mularoni, L., Ramos‑Rodríguez, Mireia, & Pasquali, L. (2017). The Pancreatic Islet Regulome Browser. Frontiers in Genetics, 8(FEB), 13. https://doi.org/10.3389/fgene.2017.00013